Unanswered questions

Methanol-d in chloroform-d

2 0 7k
answers votes views
Hi, This is a question related to the question I posted earlier titled "H NMR integration". I tried adding one drop of ...
Updated: Davis Chen 11 Jun 13 '11 at 20:39

Low resolution of pepitde samples

3 0 5k
answers votes views
Dear friends, I am now trying to record the NOESY spectrum of my 30 amino acids peptide on DRX600 with a TXI cryo probe...
Posted: Yun Wang 1 / Updated: Evgeny Fadeev 5771 Jun 07 '11 at 14:00

adiabatic decoupling

1 1 6k
answers votes views
Hi NMRwikiers, for measuring scalar couplings we use some HSQC pulse sequences modified for obtaining the coupling in F1...
Posted: ptrigomou 11 / Updated: ChemMJW 99 Jun 28 '11 at 12:50

software for 1D-2D spectra assignment for small molecules

2 1 7k
answers votes views
Please advice good software for 1D and 2D spectra assignment and structure elucidation, for small organic molecules. I'm...
Posted: VVK 61 / Updated: Evgeny Fadeev 5771 May 23 '11 at 10:54

Downfield carbon paired with a upfield proton

4 1 6k
answers votes views
Dear sirs and madams, I have a natural product whose two carbon resoances are appearing at 46 and 56 ppm but theirs prot...
Posted: Jonnala Kotesh Kumar 11 / Updated: nvgramosa 11 Oct 08 '11 at 09:08

Best Relaxation delay 3D NMR

1 1 6k
answers votes views
Dear NMR WIKIers I prefer to measure best relaxation delay for 3D nmr experments by giving array ( like 0.5 , 0.6 , 0....
Updated: sri 71 May 24 '11 at 02:44

Aminoacid residue identification or assignment of protein from 3D NMR Experments

3 1 6k
answers votes views
Dear NMR Wiki'ers I am identifying aminoacid residues or assignment of protein from following 3D NMR experments HNCA...
Posted: sri 71 / Updated: Justin Frank 1 Jun 29 '16 at 19:53

H NMR integraton

3 1 12711
answers votes views
Dear all: I just synthesized a polymer. The integrations in the high-chemical-shift regime are consistent with theoretic...
Posted: Davis Chen 11 / Updated: sekhar Talluri 621 Jun 02 '11 at 13:33

Learning pulse programming

1 1 5k
answers votes views
I'm a grad student with no prior experience in pulse programming. Currently I work in rodent MRI. I want to be able to...
Posted: seedy 11 / Updated: Yoan Monneau 136 May 14 '11 at 12:27

3DNMR CBCANH experment

5 1 9k
answers votes views
Dear NMR wiki ers Iam working on protein family which can form dimers (total 20kd size ) using 25mM TRIS , 100 mM KCL...
Updated: sri 71 Aug 25 '11 at 00:09

data processing

4 1 7k
answers votes views
HELLO NMR WIKI ERS Could you please give information about the standred reference values of LINEAR PRIDICTION FORWRAD...
Updated: sri 71 May 24 '11 at 02:45

assignment of 12 kd protein

6 1 7k
answers votes views
Dear NMR Wikiers ! I encountering problem with assignment of 12 kd protein ! i assigend already 50 percent of backbone ...
Posted: sri 71 / Updated: Thomas Garner 81 Aug 30 '11 at 07:11

CT COSY pulse sequence programming

1 1 5k
answers votes views
Hi, I want to make a CT-COSY pulse sequence on a Brucker AVANCE II spectrometer. But I'm bother by incremented delay. W...
Posted: dimichu 11 / Updated: Clemens Anklin 416 May 07 '11 at 03:38

SSNMR 2H wideline probe that can access sample temperatures in the range of 20-150 K?

1 0 5k
answers votes views
Is anyone aware of NMR facilites, which possess a SSNMR equipped with a 2H wideline probe that can access sample tempera...
Posted: Cortnie Vogelsberg 21 / Updated: Alexey Potapov 21 Jul 04 '11 at 10:24

Generate inter-proton distance restraints from an X-ray structure

1 1 4k
answers votes views
Hello, Does anyone know of any program that can generate inter-proton distance restraints from an X-ray structure? I w...
Posted: Wenjin Wu 61 / Updated: Josef Chmelik 1 May 07 '13 at 05:33

Problem with both dispersed and absorbed peaks

1 1 6k
answers votes views
hi when i run homonuclear NOESY experiments in bruker 500MHz spectometer with d8 150ms(mw is 300).Though i am followi...
Updated: Ganesh 21 Apr 24 '11 at 23:21

Error 113: lid is close

1 1 6k
answers votes views
Was trying to lift sample in BMSB control suite... but the machine detected sample within and an error 113 popped out. A...
Posted: conny 11 / Updated: Jerry Hirschinger 199 Apr 19 '11 at 07:40

Chemical exchange of Tyr residues - what information can be found about dynamics?

1 1 6k
answers votes views
I have an aromatic spectrum of Tyr residues in p53 DNA binding domain. No peaks are seen for Tyr-205 at high temp, but a...
Posted: Amélie Wallenhammar 11 / Updated: Paul Driscoll 81 Apr 12 '11 at 04:30

incorrect processing of 2D HSQC in NMRPipe - what is wrong?

3 1 17534
answers votes views
i'm trying to process an HSQC by using standard scripts of NMRpipe, and get this: what is wrong in my processing? at...
Posted: nadia1230 11 / Updated: TJCarruthers 31 Apr 19 '11 at 16:10

1D projections in vnmrj, incorect slice?

0 1 2k
answers votes views
I have been trying to use the command 'proj' (in vnmrj 2.1) with a given frequencey and frequency range to do a sumn pro...
Posted: Thomas Garner 81 Apr 07 '11 at 11:00

same parameters but difference in phase why?

2 1 5k
answers votes views
hi, though this question seems to be easy for you but i am new for this software and to this field. Recently, i took sil...
Updated: Ganesh 21 Apr 24 '11 at 23:28

About paragnetic impurities, inorganic salts, bad workups, etc. and their impact on small-molecule NMR spectra

2 1 22973
answers votes views
I sometimes face the challenge of explaining to my organic chemists that, even if no impurity signals are visible in the...
Posted: Sylvain Demanze 71 / Updated: djh 1 Aug 11 '11 at 03:19

RDCs di-Methyl lysine

0 1 2k
answers votes views
We are interested in studying di-methyl lysine, given that in most cases the two methyl groups are equivalent and each h...
Posted: Thomas Garner 81 Mar 30 '11 at 13:00

bruker to varian translations

1 1 5k
answers votes views
Does anyone know a good source for bruker to varian translations in terms of commands and general terms? ...
Updated: Thomas Garner 81 Mar 29 '11 at 07:06

Correlations across glycosidic bonds

2 1 7k
answers votes views
I am studying carbohydrates and was wanting to know if it was possible to record correlations through the ether linkage ...
Posted: Thomas Garner 81 / Updated: SankarampadiAravamudhan 91 Apr 11 '11 at 01:04

How to study polymer degradation by gamma and X-Ray radiation?

0 1 4k
answers votes views
Hi, I was asked to study polyethylene degradated by gamma and Xrays. I planed to measure relaxations rates, but which on...
Posted: Anne Baudouin 36 / Updated: Evgeny Fadeev 5771 Mar 16 '11 at 08:10

two triplets and no quartet?

4 1 8k
answers votes views
Hello all, I have spent approximately 4 hours trying to analyze an H NMR consisting of two doublets of doublets (pe...
Posted: Kelsey O'Dell 11 / Updated: joenmr 1 Feb 18 '15 at 10:44

optimising o1 in solid state nmr

1 0 6k
answers votes views
I'm a little bit confused about setting o1, in the case of a solid sample First o1 is the offset of the transmitter fre...
Updated: silvernmr 11 Mar 09 '11 at 06:17

transfer of data sets/pulse sequences from Xwinnmr/DRX to Avance III/topspin

1 1 4k
answers votes views
How do I transfer data sets ( with pulse sequences for measurements of various cross- -relaxtion rates) collected unde...
Posted: liliya 21 / Updated: Wendy Gong 1 Mar 09 '11 at 03:31

setting up solid echo on bruker

4 1 12497
answers votes views
Hello, I need to set up aquisition parameters for an echo solid sequence on bruker. In order to analyse deuteraed sample...
Updated: silvernmr 11 Mar 06 '11 at 12:39

Basics of filtered NOE experiment

1 1 5k
answers votes views
I have not fully understood the mechanism of the filtered NOE experiment. What does it tell you? Are you able to disting...
Posted: Amelie W 11 / Updated: Evgeny Fadeev 5771 Mar 03 '11 at 17:44

Bruker DRU ADC-overflow warning message in Topspin during HSQCEDETGP

6 1 23958
answers votes views
To experienced Bruker users: I often get the following message in ICON-NMR while running HSQC/HMQC: "zg: DRU warning: n ...
Posted: Sylvain Demanze 71 / Updated: djh 1 Aug 11 '11 at 02:49

Bruker Tpospin for brain spectroscopy analysis

1 1 5k
answers votes views
Hi I am using Bruker Tpospin for brain spectroscopy analysis. I am new to this software. My question is how do I make s...
Posted: surya 11 / Updated: djh 1 Aug 11 '11 at 02:57

Problems about VnmrJ 2.3A (2 shimDriver)

0 0 2k
answers votes views
when shimming with shimDriver, there may be an error message as 'usage - dfid or dfid#' and then the autoshim procedure ...
Posted: Frey 61 Feb 26 '11 at 22:23

Problems about VnmrJ 2.3A (1.shimming)

0 1 3k
answers votes views
when shimming with Fid scan, the fid/spectrum can't be displayed in real time. ...
Posted: Frey 61 Feb 26 '11 at 22:22

Problems about VnmrJ 2.3A(3. fid display style)

0 0 3k
answers votes views
How can I change the line style of the spectrum or fid in viewports? The line of spectrum seems too narrow. ...
Updated: Frey 61 Feb 26 '11 at 22:24

Distinguish between protonation and conformational change?

2 1 5k
answers votes views
Hi all, In a folded protein with 13C-delta labeled glutamates, how can one distinguish between chemical shift due to pr...
Posted: RCKC 11 / Updated: SankarampadiAravamudhan 91 Feb 27 '11 at 22:59

Area of effect?

4 1 5k
answers votes views
What defines the area of effect of nuclear magnetic resonance? Is it the magnetic field? the frequency? Or just the diam...
Posted: M Kieselbach 11 / Updated: Dmitry Mainichev 31 Mar 22 '11 at 19:00

Question about bandwidth

3 1 9k
answers votes views
Is acquisition bandwidth and receiver bandwidth the same?? am confused with the terminology....please clarify....thanks ...
Posted: cyclone 21 / Updated: SankarampadiAravamudhan 91 Feb 14 '11 at 07:36

How can I calculate a carbon-proton coupling constant for a molecule?

1 1 8k
answers votes views
I'm trying to explain a missing HMBC peak, and having a coupling constant less than 10 Hz would do that nicely. It's a f...
Posted: Toth 11 / Updated: sekhar Talluri 621 Mar 05 '11 at 09:58

Pureshift and Pureshift oneshot download problem

2 1 4k
answers votes views
Hi, I am interested in trying these two sequences, I amtrying to work out suitable parameters and thought the "sample da...
Updated: David Grace 11 Feb 07 '11 at 02:38

peptide protein interaction

6 1 10144
answers votes views
I have determined the structure of a 110 residues protein(11kDa) which is known to interact with a 15mer peptide. Now I ...
Posted: man05 11 / Updated: Justin Frank 1 Jun 27 '16 at 22:44

How to pick peaks manually in nmrview?

1 1 5k
answers votes views
Is there any way to pick peaks manually in nmrview using the red/black cursors? ...
Posted: Kaustubh 21 / Updated: Ilango 171 Mar 04 '11 at 09:10

Might anyone donate a lower end NMR instrument?

3 1 6k
answers votes views
Hello, I am working in this really small university and things would be so better if we had a 60 or 90 MHz. I was wonder...
Posted: Pimezon 11 / Updated: Damodaran Krishnan Achary 21 Jan 21 '11 at 12:51

VNMRJ "No data in data file"

1 1 6k
answers votes views
I'm trying to display a 3D Varian file in VNMRJ. I can see values in the fid file (using the "od" utility) and convert t...
Posted: Gerard 56 / Updated: Bharathwaj 112 Jan 19 '11 at 09:05

How to correctly set ROESY spin-lock power?

0 1 6k
answers votes views
I'm using roesyph.2 pulse sequence (Bruker) and I would like to know how to calculate spin-lock power in Hz for this exp...
Posted: Justyna Sikorska 11 / Updated: Evgeny Fadeev 5771 Mar 07 '11 at 22:22

Why is chemical shift range of 13C wider than of 1H nuclei?

6 3 21512
answers votes views
Why the chemical shift range of 1H nmr is ~20 ppm wheras for 13C nmr it is ~230 ppm? ...
Posted: sameer deka 31 / Updated: Yoan Monneau 136 Feb 15 '11 at 11:23

cs rosetta compilation for linux 32

1 1 6k
answers votes views
Hi guys : I was wondering if anyone knows where I can find CS-Rosetta compiled for 32 bit linux..... Im having trouble ...
Posted: j 131 / Updated: Evgeny Fadeev 5771 Jan 13 '11 at 12:27

distorted DOSY ID

9 1 9k
answers votes views
Why are some Dosy spectra 1d so distorted (like the one below)?. How can this be overcome? ...
Posted: @ 11 / Updated: Umayal Rakesh 1 Mar 30 '15 at 00:08

cs23d vs. cs-rosetta

2 1 7k
answers votes views
Does anybody have any thoughts on this ? I dont really know which is better, CS23D or CS-ROSETTA. Clearly they are ide...
Posted: j 131 / Updated: Thomas Garner 81 Jan 19 '11 at 08:05
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