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Hello,
Does anyone know of any program that can generate inter-proton distance restraints from an X-ray structure?
I w...
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Does anybody have any thoughts on this ? I dont really know which is better, CS23D or CS-ROSETTA. Clearly they are ide...
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Trying to calculate a structure using sa.inp script and the energy in the cooling loop increases instead of going down.
...
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I had two problems like this one recently:
have protein (in solution) of known general structure
resonance assignments...
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Hello, I'm currently working on solving a peptide NMR solution structure using NIH-XPLOR.
I find myself a lot starting ...
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I'm gearing up for a project in which we're looking at the structure of a short peptide that should fold upon binding di...
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Hello, are you using pymol to analyze NMR structures? (I've been mostly using Molmol before).
Have you learned any PyMo...
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Hi folks,
I've been using Molmol, but found significant issues when working with a non-standard structure.
For example...
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By smaller peptide I mean somewhere around 15-20 aminoacids, having a cycle or two that constrain the geometry.
Also - ...
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I've only solved NMR structure of globular proteins (actually in a complex with a short stretch of DNA), but never a str...
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So you've analyzed your NOE data sets and have 1000+ assigned restraints, with probably inevitable errors. Going through...
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... solving a structure of a cyclic peptide with Ornithine residue, where Orn side-chain participates in an amide bond.
...