Tagged questions

Is there a script that converts Sparky .list files to XPLOR input format?

1 1 4k
answers votes views
I have 5 different RDCs that I've extracted using simple perl scripts and Sparky .list files. I want to use XPLOR for s...
Evgeny Fadeev 5771 Mar 15 '10 at 14:37

How do you determine error on the peak position?

2 0 8k
answers votes views
Hello, could anyone suggest a method to determine error (maybe standard deviation or some other estimate) of a peak posi...
sekhar Talluri 621 Mar 14 '10 at 08:46

Are there tools that automate obtaining RDC values and accuracy from NMR data?

2 1 4k
answers votes views
Hello. I was wondering if there are any software programs to extract RDC values, and their associated errors from proces...
bernie o'hare 111 Mar 13 '10 at 10:30

How to process gNhsqc_IPAP.c data with nmrPipe?

2 0 9k
answers votes views
Hello, I know that this problem has been discussed a number of times on the nmrPipe newsgroup and there are some helpfu...
Evgeny Fadeev 5771 Mar 03 '10 at 13:11

How do you use PyMol to visualize structure bundles and related MR data?

0 0 5k
answers votes views
Hello, are you using pymol to analyze NMR structures? (I've been mostly using Molmol before). Have you learned any PyMo...
Evgeny Fadeev 5771 Mar 02 '10 at 12:29

Are there alternatives to MOLMOL for visualization of NMR structure ensemebles?

2 0 3k
answers votes views
Hi folks, I've been using Molmol, but found significant issues when working with a non-standard structure. For example...
Evgeny Fadeev 5771 Mar 02 '10 at 08:05

Is it possible to run nmrPipe on Microsoft Windows?

1 0 5k
answers votes views
Hello, I'd like to be able to run nmrPipe on windows - under cygwin or something like that. Has this been done before? ...
uab_nmr 46 Feb 26 '10 at 04:54

What software can do relaxation matrix analysis of NOE?

1 0 5k
answers votes views
Hello, could you suggest software to conduct proper relaxation matrix analysis of NOE? Is it available anywhere on the ...
sekhar Talluri 621 Feb 13 '10 at 12:43

How to display NMR structure of molecule with non-standard residues?

1 0 7k
answers votes views
... solving a structure of a cyclic peptide with Ornithine residue, where Orn side-chain participates in an amide bond. ...
Evgeny Fadeev 5771 Feb 02 '10 at 08:59

Example of XPLOR NMR structure with unnatural custom residues

0 2 2k
answers votes views
Hi there! Could anyone share an example of NIH-XPLOR files for annealing of NMR structure with non-natural residues. May...
anita 31 Jan 19 '10 at 11:40
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